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SYNTHESIS – EUREKAMOMENTS IN ORGANIC CHEMISTRY https://amcrasto.theeurekamoments.com DR ANTHONY MELVIN CRASTO Ph.D, WorldDrugTracker, Glenmark scientist ( Ph.D, ICT) helping millions with chemistry websites, million hits on google sites, Intention is to help chemists across the world, content is academic Wed, 13 Nov 2013 10:30:41 +0000 en-US hourly 1 https://wordpress.org/?v=6.5.2 Whisky lactone https://amcrasto.theeurekamoments.com/2013/11/13/whisky-lactone/ Wed, 13 Nov 2013 10:30:41 +0000 http://amcrasto.theeurekamoments.com/?p=1177 Continue reading Whisky lactone]]>

Whisky Lactone

Whisky lactone, also known as β-methyl-γ-octalactone or quercus lactone (from the Latin for oak treeQuercus alba), is a flavouring found in American bourbon whiskies, and is also found in all types of oak. The flavour gets into the whisky when it’s matured in oak barrels. The pure molecule has a fierce, strong, and sweet smell and can be dissolved in alcohol in any proportion.

6

http://www.sciencedirect.com/science/article/pii/S0957416698000809

5-butyl-4-methyloxolan-2-one | CAS Registry Number: 39212-23-2
Synonyms: Whiskey lactone, Oaklactone, 3-Methyl-4-octanolide, cis-3-Methyl-4-octanolide, beta-Methyl-gamma-octalactone, W380318_ALDRICH, FEMA No. 3803, EINECS 254-357-4, 5-Butyl-4-methyldihydro-2(3H)-furanone, 5-Butyldihydro-4-methyl-2(3H)-furanone, cis-.beta.-Methyl-.gamma.-Octalactone, 2(3H)-Furanone, 5-butyldihydro-4-methyl-, 4-Hydroxy-3-methyloctanoic acid lactone, 5-Butyldihydro-4-methylfuran-2(3H)-one, 5-Butyl-4-methyl-dihydro-2(3H)-furanone, ()-5-Butyl-4-methyldihydro-2(3H)-furanone, 2(3H)-Furanone, 5-butyldihydro-4-methyl-, cis-, 39212-23-2

The cis isomer is the chemical extracted from oak wood that gives whiskey a coconut-like aroma. But not all isomers of this molecule are quite this tasty. The trans isomers of 3-methyl-4-octanolide is by contrast, used as an insect repellent.

 

 

  • Whiskey lactone (3-methyl-4-octanolide) is one of perfume components of whiskey and wine.
  •  
    There are stereoisomers in the natural whiskey lactone, which are of the trans-type or cis-type in accordance with the configuration of methyl group at 3-position thereof and butyl group at 4-position thereof.
    As compared to trans-whiskey lactone
    [(3S,4R)-3-methyl-4-octanolide] (D), generally, a less amount of cis-whiskey lactone
    [(3S,4S)-3-methyl-4-octanolide] (A) is contained, for example, in whiskey and wine. However, cis-whiskey lactone (A) is superior in the characteristic of perfume.

    Figure imgb0001


    However, means for selectively synthesizing natural type cis-whiskey lactone (A) having superior properties than those of trans-type isomer (D) as described above has not been known.

  •  
    Liebigs Annalen der Chemie, No. 12, 1986, pages 2112 – 2122, disclose a method, how all four stereoisomers of 3-methyl-4-octanolide can be produced. It is taught to separate a racemic cis/trans octanolide into the two cis- and the two trans-isomers chromatographically. Furthermore, it is disclosed how to hydrolyse a lactone ring with potassium hydroxide and to protect the carboxy group subsequently yielding the isopropyl carboxylic ester. Diastereomeric pairs of the acid-protected gamma-hydroxyacid are formed by reaction with an optically active carboxylic acid, and are separated from each other by liquid chromatography. It is disclosed how to perform the hydrolysis of the diastereomers and the relactonization to obain the four stereoisomers of whiskey-lactone. No reaction at the 4-hydroxy group is suggested to invert the configuration of the chiral centre
  • Synthesis, No. 1, 1981, pages 1-28, discloses the use of diethyl azodicarboxylate and triphenylphosphine in synthesis and transformation of natural products. However, there is no indication for a combination of these documents. Furthermore, it is well-known that the Mitsunobu reaction proceeds according to Sn2 reaction mechanism. In the case of 3,4-trans compound (III) which is a substrate of the method of the present invention, the steric hindrance to the 4-methyl group is large because of the influence from the methyl group at a 3-position.

 

Physical data of the obtained cis-whiskey lactone are
Boiling Point : 124 – 126°C/(17 mmHg) 2266 Pa
¹H-NMR(CDCl₃) : δ 0.92(3H, t, J = 7.0 Hz), 1.02(3H, d, J = 6.9 Hz), 1.20 – 1.75(6H, m), 2.20(1H, dd, J = 3.8 and 16.8 Hz), 2.51 – 2.64(1H, m), 2.70(1H, dd, J = 7.8 and 16.8 Hz), 4.40 – 4.48(1H, m) (ppm units)

 

 

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Amide Hydrogenation in Flow Reactor https://amcrasto.theeurekamoments.com/2013/11/13/amide-hydrogenation-in-flow-reactor/ Wed, 13 Nov 2013 04:41:14 +0000 http://amcrasto.theeurekamoments.com/?p=1194 thumbnail image: Amide Hydrogenation in Flow Reactor

http://www.chemistryviews.org/details/ezine/5392681/Amide_Hydrogenation_in_Flow_Reactor.html

Amide Hydrogenation in Flow Reactor (wiley)

Amines are produced by amide hydrogenation over a bimetallic platinum–rhenium catalyst in a high-throughput vertical flow reactor

Read more

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Article On Alternative Solvents:  Shades of Green https://amcrasto.theeurekamoments.com/2013/10/31/article-alternative-solvents%e2%80%89-shades-of-green/ Thu, 31 Oct 2013 05:03:41 +0000 http://amcrasto.theeurekamoments.com/?p=1180 Continue reading Article On Alternative Solvents:  Shades of Green]]> Abstract Image

The use of alternative reaction solvents is reviewed in terms of life cycle. Supercritical CO2, ionic liquids, fluorous solvents, water, and renewable organics are compared on the basis of their solvency, ease of use, reusability, health and safety, environmental impact, and economic cost.

James H. Clark * and Stewart J. Tavener
Green Chemistry Centre, Department of Chemistry, University of York, Heslington, York, U.K. YO10 5DD
Org. Process Res. Dev., 2007, 11 (1), pp 149–155
DOI: 10.1021/op060160g
Publication Date (Web): November 4, 2006

http://pubs.acs.org/doi/full/10.1021/op060160g?prevSearch=GREEN%2BSOLVENTS&searchHistoryKey=

This article  critically reviewS the use of alternative solvents in chemistry. Rather than follow the well-trodden path of discussing in turn the reactions that have been performed in each major type of alternative solvent, we will instead structure our article in terms of what we consider to be the fundamental issues:  life cycle analysis (so as to establish the “green” and sustainability aspects from the outset), solvency (so as to consider what is needed in the application and how the alternatives manage to meet these needs), and application (to consider practical issues in both process and product).

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NANOPUTIANS https://amcrasto.theeurekamoments.com/2013/09/27/nanoputians/ Fri, 27 Sep 2013 14:36:20 +0000 http://amcrasto.theeurekamoments.com/?p=1131 Continue reading NANOPUTIANS]]>

Systematic name
2-(4-{2-[3,5-bis(pent-1-yn-1-yl)phenyl]ethynyl}-2,5-bis(3,3-dimethylbut-1-yn-1-yl)phenyl)-1,3-dioxolane
Other names
1,3-dioxolane, 2-[2,5-bis(3,3-dimethyl-1-butyn-1-yl)-4-[2-(3,5-di-1-pentyn-1-ylphenyl)ethynyl]phenyl]
NanoKid
NanoPutian
618904-86-2  cas

NanoPutians are a series of organic molecules whose structural formulae resemble human forms.[1] James Tour et al. (Rice University) designed and synthesized these compounds in 2003 as a part of a sequence of chemical education for young students.[2] The compounds consist of two benzene rings connected via a few carbon atoms as the body, four acetylene units each carrying an alkyl group at their ends which represents the hands and legs, and a 1,3-dioxolane ring as the head. Tour and his team at Rice University used the NanoPutians in their NanoKids educational outreach program. The goal of this program was to educate children in the sciences in an effective and enjoyable manner. They have made several videos featuring the NanoPutians as anthropomorphic animated characters.

Construction of the structures depends on Sonogashira coupling and other synthetic techniques. By replacing the 1,3-dioxolane group with an appropriate ring structure, various other types of putians have been synthesized, e.g. NanoAthlete, NanoPilgrim, and NanoGreenBeret. Placing thiol functional groups at the leg enables them to “stand” on a gold surface.
“NanoPutian” is a portmanteau of nanometer, a unit of length commonly used to measure chemical compounds, and lilliputian, a fictional population of humans in the novel Gulliver’s Travels.

Background

NanoKids Educational Outreach Program]

While there are no chemical uses for the NanoKid or any of its subsidiaries, James Tour has turned the NanoKid into a lifelike character to educate children in the sciences. The goals of the outreach program, as described on the NanoKids website, are:
  • “To significantly increase students’ comprehension of chemistry, physics, biology, and materials science at the molecular level.”
  • “To provide teachers with conceptual tools to teach nanoscale science and emerging molecular technology.”
  • “To demonstrate that art and science can combine to facilitate learning for students with diverse learning styles and interests.”
  • “To generate informed interest in nanotechnology that encourages participation in and funding for research in the field.”[3]
To accomplish these goals, several video clips, CDs, as well as interactive computer programs were created. Tour and his team invested over $250,000 into their project. In order to raise the funds for this endeavor, Tour used unrestricted funds from his professorship and small grants from Rice University, the Welch Foundation, the nanotech firm Zyvex, and Texas A&M University. Tour also received $100,000 in 2002 from the Small Grants for Exploratory Research program, a division of the National Science Foundation.[4]
The main characters in the videos are animated versions of the NanoKid. They star in several videos and explain various scientific concepts, such as the periodic tableDNA, and covalent bonding.
Rice conducted several studies into the effectiveness of using the NanoKids materials. These studies found mostly positive results for the use of the NanoKids in the classroom. A 2004-2005 study in two schools districts in Ohio and Kentucky found that using NanoKids led to a 10-59% increase in understanding of the material presented. Additionally, it was found that 82% of students found that NanoKids made learning science more interesting.[5]

ChemSpider 2D Image | Nanokid | C39H42O2

Synthesis of NanoKid

Upperbody of NanoKid

To create the first NanoPutian, dubbed the NanoKid, 1,4-dibromobenzene was iodinated in sulfuric acid. To this product, “arms”, or 3,3-Dimethylbutyne, were then added through Sonogashira coupling. Formylation of this structure was then achieved through using the organolithium reagent n-butyllithium followed by quenching with N,N-dimethylformamide (DMF) to create the aldehyde. 1,2-Ethanediol was added to this structure to protect the aldehyde using p-toluenesulfonic acid as a catalyst. Originally, Chanteau and Tour aimed to couple this structure with alkynes, but this resulted in very low yields of the desired products. To remedy this, the bromide was replaced withiodide through lithium-halogen exchange and quenching by using 1,2-diiodoethane. This created the final structure of the upper body for the NanoKid.[1]
Center

Lowerbody of NanoKid

The synthesis of NanoPutian’s lower body begins with nitroaniline as a starting material. Addition of Br2 in acetic acid places two equivalents of bromine on the benzene ring. NH2 is an electron donating group, and NO2 is an electron withdrawing group, which both direct bromination to the meta position relative to the NO2 substituent. Addition of [[NaNO2]], [[H2SO4]], and EtOH removes the NH2¬ substituent. The Lewis acid SnCl2, a reducing agent in THF/EtOH solvent, replaces NO2 with NH2, which is subsequently replaced by iodine upon the addition of NaNO2, H2SO4, and KI to yield 3,5-dibromoiodobenzene. In this step, the Sandmeyer reaction converts the primary amino group (NH2) to a diazonium leaving group (N2), which is subsequently replaced by iodine. Iodine serves as an excellent coupling partner for the attachment of the stomach, which is executed through Sonogashira coupling with trimethylsilylacetylene to yield 3,5-dibromo(trimethylsilylethynyl)benzene. Attachment of the legs replaces the Br substituents with 1-pentyne through another Sonogashira coupling to produce 3,5-(1′-Pentynyl)-1-(trimethylsilylethynyl) benzene. To complete the synthesis of the lower body, the TMS protecting group is removed by selective deprotection through the addition of K2CO3, MeOH, and CH2Cl2 to yield 3,5-(1′-Pentynyl)-1-ethynylbenzene.[1]
Center

Attachment of Upperbody to Lowerbody of NanoKid

To attach the upper body of the NanoKid to the lower body, the two components were added to a solution of bis(triphenylphosphine)palladium(II) dichloridecopper(I) iodide,TEA, and THF. This resulted in the final structure of the NanoKid.[1]
Center

Derivatives of NanoKid

Synthesis of NanoProfessionals[]

The series of NanoProfessionals were created using the NanoKid as the starting material. This was done by adding an excess amount of a 1,2- or 1,3- diol to the NanoKid in the presence of a catalytic amount of p-toluenesulfonic acid and microwave oven-irradiation. The use of microwave irradiation reduced the reaction times. These reactions resulted in an acetal exchange, which changed the structure of the head of the NanoKid to create the different head structures of the NanoProfessionals, which include: NanoAthlete, NanoPilgrim, NanoGreenBeret, NanoJester, NanoMonarch, NanoTexan, NanoScholar, NanoBaker, and NanoChef. By creating a series of different figures, the ultimate product was a recognizably diverse population of NanoPutians.[2]
Although the majority of the figures are depicted in their equilibrium conformations, some of the NanoPutians include nonequilibrium conformations in order to make them more recognizable to nonchemists. Many liberties were taken in the visual depiction of the head dressings of the NanoPutians.[2]
The entire population of NanoPutians (with the exception of the NanoChef) were generated in one microwave oven reaction and confirmed by mass spectrometry and 1HNMR.[1]
Center
Below is a table listing the diols needed to convert the NanoKid into various NanoProfessionals. The diols used to create NanoPilgrim and NanoTexan were made through reductive pinacol coupling of the 1,4- and 1,5-diketones with SmI2 and Mg/TiCl4. To create the diols used to make the NanoMonarch and the NanoScholar, catalytic OsO4 was used to dihydroxylate the respective cycloalkenes. The diastereomeric ratios were determined through 1H NMR using the diastereotopic acetal protons.[1]
Right

Synthesis of the NanoKid in Upright Form]

Stick Figure NanoPutian in its Energy Minimized Conformation. Determined Using Spartan.

3-Butyn-1-ol was reacted with methanesulfonyl chloride and triethanolamine to produce its mesylate. The mesylate was displaced to make thiolacetate. The thiol was coupled with 3,5-dibromo(trimethylsilylethynyl)benzene to create a free alkyne. The resulting product, 3,5-(4’-thiolacetyl-1’-butynyl)-1-(trimethylsilylethynyl)-benzene, had its trimethylsilyl group removed using tetra-n-butylammonium fluoride (TBAF) and AcOH/Ac2O in THF. The free alkyne was then coupled with the upper body product from the earlier synthesis. This resulted in a NanoKid with protected thiol feet.[1]
To make the NanoKid “stand’, the acetyl protecting groups were removed through the use of ammonium hydroxide in THF to create the free thiols. A gold-plated substrate was then dipped into the solution and incubated for four days. Ellipsometry was used to determine the resulting thickness of the compound, and it was determined that the NanoKid was upright on the substrate.[1]
Center

Synthesis of NanoPutian Chain

Synthesis of the upper part of the NanoPutian chain begins with 1,3-dibromo-2,4-diiodobenzene as the starting material. Sonogashira coupling with 4-oxytrimethylsilylbut-1-yne produces 2,5-bis(4-tert-butyldimethylsiloxy-1′-butynyl)-1,4-di-bromobenzene. One of the bromine substituents is converted to an aldehyde through an SN2 reaction with the strong base, n-BuLi, and THF in the aprotic polar solvent, DMF to produce 2,5-bis(4-tert-butyldimethylsiloxy-1′-butynyl)-4-bromobenzaldehyde. Another Sonogashira coupling with 3,5-(1′-Pentynyl)-1-ethynylbenzene attaches the lower body of the NanoPutian. The conversion of the aldehyde group to a diether “head” occurs in two steps. The first step involves addition of ethylene glycol and trimethylsilyl chloride (TMSCl) in CH2Cl2 solvent. Addition of TBAF in THF solvent removes the silyl protecting group.[1]
Center
Right

References

  1. a b c d e f g h i Chanteau, S. H.; Tour, J. M. (2003). “Synthesis of Anthropomorphic Molecules:  The NanoPutians”The Journal of Organic Chemistry 68 (23): 8750–8766.doi:10.1021/jo0349227PMID 14604341edit
  2. a b c Chanteau, S. H.; Ruths, T.; Tour, J. M. (2003). “Arts and Sciences Reunite in Nanoput: Communicating Synthesis and the Nanoscale to the Layperson”Journal of Chemical Education 80 (4): 395. doi:10.1021/ed080p395edit
  3. ^ “Welcome to Nanokids.” Accessed May 6, 2013. http://nanokids.rice.edu/.
  4. ^ “C&EN: EDUCATION – ‘NANOKIDS’ TRY TO GET INTO MIDDLE SCHOOL.” Accessed May 10, 2013. http://pubs.acs.org/cen/education/8214/8214nanokids.html.
  5. ^ “NanoKids – Mission.” Accessed May 6, 2013. http://cohesion.rice.edu/naturalsciences/nanokids/mission.cfm?doc_id=3039.

External link

http://cohesion.rice.edu/naturalsciences/nanokids/index.cfm

In 2003, there was a paper published which looked like it was going to be a good candidate for the Ig Nobel Prize. It was “Synthesis of Anthropomorphic Molecules: The NanoPutians” by Professor James Tour, a chemistry professor at Rice University’s Institute for Nanoscale Science and Technology. The word “NanoPutian” is a portmanteau of “nano”, which means a billionth and the “Lilliputian” from the novel Gulliver’s Travels.
The Tour group designed and synthesized a number of human-shaped organic molecules in this paper. Shown in Figure 1 is a molecule named NanoKid, which was chosen by the group as a basic skeleton. The 3-D model looks like the figure on the right and the structural formula used by chemists is shown on the left. The structural formula might look more human, since the oxygen atoms look kind of like the eyes.


Fig 1 NanoKid

The functional group used for the head part of NanoKid is called acetal. This group is easily exchangeable to make NanoPutians of various occupations (Figure 2). Let’s not be too picky about the bond angles of NanoMonarch and NanoTexan.


Fig 2 various NanoPutians

Unfortunately, NanoBalletDancer seems to be the only one having a different posture (Figure 3). Personally, I would be interested in making NanoPitcher or NanoGermanSuplex!


Fig 3 NanoBalletDancer

The Tour Group also synthesized NanoPutians standing on gold surface with thiol functional groups on their feet, a NanoPutian couple dancing (Figure 4), and even a polymer of NanoPutians (Figure 5).


Fig 4 NanoPutian Couple

Fog 5 NanoPutian polymer

NanoPutians aren’t actually the first example of human-shaped molecule. For example, the molecule shown in Figure 6 has appeared as a joke in a journal published on April Fool’s Day. The molecule shown in Figure 7 has been introduced once as Buddha molecule. Nevertheless, NanoPutians were probably the first case where human-shaped molecules were synthesized systematically(?) to be published as a full paper.


Fig 6 human-shaped molecule Fig 7 molecular Buddha

The Role of NanoPutians
Besides being human-shaped, the NanoPutian molecules have neither notable properties nor potential usefulness for future. The synthesis is also too straightforward to make any significant methodological contribution to chemical science.
Then how did this research get funded and get to be published on Journal of Organic Chemistry? It turns out that the synthesis was a part of the chemistry education program at Rice University aimed at introducing nanotechnology to young students. In fact, it has also been on the cover page of Journal of Chemical Education too. It’s funny though, to imagine the faces of the journal editors when they first read the paper.
But come to think of it, molecules like dodecahedrane and kekulene might not be so different in terms of not having much to appeal other than their structural beauty. Even “total synthesis of biologically active natural products”, the most respected subfield of organic chemistry, has been criticized on its meaning recently. In a way, the NanoPutian research seems to me as a voice saying “synthetic targets should be selected more freely” and almost as an antithesis against the state of organic chemistry today.

Anyway, this paper was introduced by general media and was also one of the topics that received most feedbacks on my homepage. There were those who dismissed it as a meaningless play by chemists, but in terms of directing public interest toward organic chemistry wasn’t it a hundred times more effective than ordinary researches? I think it was an excellent work for the education of young chemists as well.
Professor Tour’s playful sense of molecular design can be seen in his research of NanoCars too, which I will introduce in a separate column. This is a wonderful work which can impress both serious scientists and general public.


nanohippie


nanorobot

NanoSports:
Nano’Tainment:

– See more at: http://organicchemistrysite.blogspot.in/#sthash.KDZiGxlJ.dpuf

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The first generic version of the oral chemotherapy drug Xeloda (capecitabine) has been approved by the U.S. Food and Drug Administration to treat cancers of the colon/rectum or breast https://amcrasto.theeurekamoments.com/2013/09/17/the-first-generic-version-of-the-oral-chemotherapy-drug-xeloda-capecitabine-has-been-approved-by-the-u-s-food-and-drug-administration-to-treat-cancers-of-the-colonrectum-or-breast/ https://amcrasto.theeurekamoments.com/2013/09/17/the-first-generic-version-of-the-oral-chemotherapy-drug-xeloda-capecitabine-has-been-approved-by-the-u-s-food-and-drug-administration-to-treat-cancers-of-the-colonrectum-or-breast/#comments Tue, 17 Sep 2013 04:18:05 +0000 http://amcrasto.theeurekamoments.com/?p=1107 Continue reading The first generic version of the oral chemotherapy drug Xeloda (capecitabine) has been approved by the U.S. Food and Drug Administration to treat cancers of the colon/rectum or breast]]>

capecitabine

154361-50-9

  • R-340, Ro-09-1978, Xeloda

pentyl [1-(3,4-dihydroxy-5-methyltetrahydrofuran-2-yl)-5-fluoro-2-oxo-1H-pyrimidin-4-yl]carbamate

MONDAY Sept. 16, 2013 — The first generic version of the oral chemotherapy drug Xeloda (capecitabine) has been approved by the U.S. Food and Drug Administration to treat cancers of the colon/rectum or breast, the agency said Monday in a news release.

This year, an estimated 142,820 people will be diagnosed with cancer of the colon/rectum, and 50,830 are predicted to die from the disease, the FDA said, citing the U.S. National Cancer Institute. An estimated 232,340 women will be diagnosed with cancer of the breast this year, and some 39,620 will die from it.

The most common side effects of the drug are diarrhea, vomiting; pain, redness, swelling or sores in the mouth; fever and infection, the FDA said.

The agency stressed that approved generics have the same high quality and strength as their brand-name counterparts.

License to produce the generic drug was given to Israel-based Teva Pharmaceuticals. The brand name drug is produced by the Swiss pharma firm Roche.

Capecitabine (INN/kpˈstəbn/ (Xeloda, Roche) is an orally-administeredchemotherapeutic agent used in the treatment of metastatic breast andcolorectal cancers. Capecitabine is a prodrug, that is enzymatically converted to 5-fluorouracil in the tumor, where it inhibits DNA synthesis and slows growth of tumor tissue. The activation of capecitabine follows a pathway with three enzymatic steps and two intermediary metabolites, 5′-deoxy-5-fluorocytidine (5′-DFCR) and 5′-deoxy-5-fluorouridine (5′-DFUR), to form 5-fluorouracil

Indications

Capecitabine is FDA-approved for:

  • Adjuvant in colorectal cancer Stage III Dukes’ C – used as first-line monotherapy.
  • Metastatic colorectal cancer – used as first-line monotherapy, if appropriate.
  • Metastatic breast cancer – used in combination with docetaxel, after failure of anthracycline-based treatment. Also as monotherapy, if the patient has failed paclitaxel-based treatment, and if anthracycline-based treatment has either failed or cannot be continued for other reasons (i.e., the patient has already received the maximum lifetime dose of an anthracycline).

In the UK, capecitabine is approved by the National Institute for Health and Clinical Excellence (NICE) for colon and colorectal cancer, and locally advanced or metastatic breast cancer.[1] On March 29, 2007, the European Commission approved Capecitabine, in combination with platinum-based therapy (with or without epirubicin), for the first-line treatment of advanced stomach cancer.

Capecitabine is a cancer chemotherapeutic agent that interferes with the growth of cancer cells and slows their distribution in the body. Capecitabine is used to treat breast cancer and colon or rectum cancer that has spread to other parts of the body.

Formulation

Capecitabine (as brand-name Xeloda) is available in light peach 150 mg tablets and peach 500 mg tablets.

 

 

WO2009066892A1

Capecitabine is an orally-administered anticancer agent widely used in the treatment of metastatic breast and colorectal cancers. Capecitabine is a ribofuranose-based nucleoside, and has the sterochemical structure of a ribofuranose having an β-oriented 5-fluorocytosine moiety at C-I position.

US Patent Nos. 5,472,949 and 5,453,497 disclose a method for preparing capecitabine by glycosylating tri-O-acetyl-5-deoxy-β-D-ribofuranose of formula I using 5-fluorocytosine to obtain cytidine of formula II; and carbamoylating and hydrolyzing the resulting compound, as shown in Reaction Scheme 1 :

Reaction Scheme 1

Figure imgf000002_0001

1

The compound of formula I employed as an intermediate in Reaction

Scheme 1 is the isomer having a β-oriented acetyl group at the 1 -position, for the reason that 5-fluorocytosine is more reactive toward the β-isomer than the α-isomer in the glycosylation reaction due to the occurrence of a significant neighboring group participation effect which takes place when the protecting group of the 2-hydroxy group is acyl.

Accordingly, β-oriented tri-O-acetyl-5-deoxy-β-D-ribofuranose (formula

I) has been regarded in the conventional art to the essential intermediate for the preparation of capecitabine. However, such a reaction gives a mixture of β- and α-isomers from which cytidine (formula II) must be isolated by an uneconomical step.

Meanwhile, US Patent No. 4,340,729 teaches a method for obtaining capecitabine by the procedure shown in Reaction Scheme 2, which comprises hydrolyzing 1-methyl-acetonide of formula III to obtain a triol of formula IV; acetylating the compound of formula IV using anhydrous acetic anhydride in pyridine to obtain a β-/α-anomeric mixture of tri-O-acetyl-5-deoxy-D-ribofuranose of formula V; conducting vacuum distillation to purify the β-/α-anomeric mixture; and isolating the β-anomer of formula I therefrom:

Reaction Scheme 2

Figure imgf000003_0001

III IV

However, the above method is also hampered by the requirement to perform an uneconomical and complicated recrystallization steps for isolating the β-anomer from the mixture of β-/α-anomers of formula V, which leads to a low yield of only about 35% to 40% (Guangyi Wang et al., J. Med. Chem., 2000, vol. 43, 2566-2574; Pothukuchi Sairam et al., Carbohydrate Research, 2003, vol. 338, 303-306; Xiangshu Fei et al., Nuclear Medicine and Biology, 2004, vol. 31, 1033-1041; and Henry M. Kissman et al., J. Am. Chem. Soc, 1957, vol. 79, 5534-5540).

Further, US Patent No. 5,476,932 discloses a method for preparing capecitabine by subjecting 5′-deoxy-5-fluorocytidine of formula VI to a reaction with pentylchloroformate to obtain the compound of formula VII having the amino group and the 2-,3-hydroxy groups protected with C5Hi1CO2 groups; and removing the hydroxy-protecting groups from the resulting compound, as shown in Reaction Scheme 3 :

Reaction Scheme 3

Figure imgf000004_0001

Vl VII 1

However, this method suffers from a high manufacturing cost and also requires several complicated steps for preparing the 5′-deoxy-5-fluorocytidine of formula VI: protecting the 2-,3-hydroxy groups; conducting a reaction thereof with 5-fluorocytosine; and deprotecting the 2-,3-hydroxy groups.

Accordingly, the present inventors have endeavored to develop an efficient method for preparing capecitabine, and have unexpectedly found an efficient, novel method for preparing highly pure capecitabine using a trialkyl carbonate intermediate, which does not require the uneconomical β-anomer isolation steps.

synthesis

WO2010065586A2

more info and description

Aspects of the present invention relate to capecitabine and processes for the preparation thereof.

The drug compound having the adopted name “capecitabine” has a chemical name 5′-deoxy-5-fluoro-N-[(pentyloxy) carbonyl] cytidine and has structural formula I.

H

Figure imgf000002_0001

OH OH I

This compound is a fluoropyrimidine carbamate with antineoplastic activity. The commercial product XELODA™ tablets from Roche Pharmaceuticals contains either 150 or 500 mg of capecitabine as the active ingredient.

U.S. Patent No. 4,966,891 describes capecitabine generically and a process for the preparation thereof. It also describes pharmaceutical compositions, and methods of treating of sarcoma and fibrosarcoma. This patent also discloses the use of ethyl acetate for recrystallization of capecitabine. The overall process is summarized in Scheme I.

Figure imgf000002_0002

Scheme I

U.S. Patent No. 5,453,497 discloses a process for producing capecitabine that comprises: coupling of th-O-acetyl-5-deoxy-β-D-hbofuranose with 5- fluorocytosine to obtain 2′,3′-di-O-acetyl-5′-deoxy-5-fluorocytidine; acylating a 2′, 3′- di-O-acetyl-5′-deoxy-5-fluorocytidine with n-pentyl chloroformate to form 5′-deoxy- 2′,3′-di-O-alkylcarbonyl-5-fluoro-N-alkyloxycarbonyl cytidine, and deacylating the 2′ and 3′ positions of the carbohydrate moiety to form capecitabine. The overall process is summarized in Scheme II.

Figure imgf000003_0001

Capecitabine

Scheme Il

The preparation of capecitabine is also disclosed by N. Shimma et al., “The Design and Synthesis of a New Tumor-Selective Fluoropyrimidine Carbamate, Capecitabine,” Bioorganic & Medicinal Chemistry, Vol. 8, pp. 1697-1706 (2000). U.S. Patent No. 7,365,188 discloses a process for the production of capecitabine, comprising reacting 5-fluorocytosine with a first silylating agent in the presence of an acid catalyst under conditions sufficient to produce a first silylated compound; reacting the first silylated compound with 2,3-diprotected-5- deoxy-furanoside to produce a coupled product; reacting the coupled product with a second silylating agent to produce a second silylated product; acylating the second silylated product to produce an acylated product; and selectively removing the silyl moiety and hydroxyl protecting groups to produce capecitabine. The overall process is summarized in Scheme III. te

Figure imgf000004_0001

R: hydrocarbyl

Figure imgf000004_0002

Scheme III

Further, this patent discloses crystallization of capecitabine, using a solvent mixture of ethyl acetate and n-heptane. International Application Publication No. WO 2005/080351 A1 describes a process for the preparation of capecitabine that involves the refluxing N4– pentyloxycarbonyl-5-fluorocytosine with trimethylsiloxane, hexamethyl disilazanyl, or sodium iodide with trimethyl chlorosilane in anhydrous acetonitrile, dichloromethane, or toluene, and 5-deoxy-1 ,2,3-tri-O-acetyl-D-ribofuranose, followed by hydrolysis using ammonia/methanol to give capecitabine. The overall process is summarized in Scheme IV.

Figure imgf000004_0003

Scheme IV

International Application Publication No. WO 2007/009303 A1 discloses a method of synthesis for capecitabine, comprising reacting 5′-deoxy-5- fluorocytidine using double (trichloromethyl) carbonate in an inert organic solvent and organic alkali to introduce a protective lactone ring to the hydroxyl of the saccharide moiety; reacting the obtained compound with chloroformate in organic alkali; followed by selective hydrolysis of the sugar component hydrolytic group using an inorganic base to give capecitabine. The overall process is summarized in Scheme V.

Figure imgf000005_0001

Scheme V

Even though all the above documents collectively disclose various processes for the preparation of capecitabine, removal of process-related impurities in the final product has not been adequately addressed. Impurities in any active pharmaceutical ingredient (API) are undesirable, and, in extreme cases, might even be harmful to a patient. Furthermore, the existence of undesired as well as unknown impurities reduces the bioavailability of the API in pharmaceutical products and often decreases the stability and shelf life of a pharmaceutical dosage form.

nmr

1H NMR(CD3OD) δ 0.91(3H5 t), 1.36~1.40(4H, m), 1.41(3H, d), 1.68~1.73(2H, m), 3.72(1H, dd), 4.08(1H, dd), 4.13~4.21(3H, m), 5.7O(1H, s), 7.96(1H, d)

 

  • The acetylation of 5′-deoxy-5-fluorocytidine (I) with acetic anhydride in dry pyridine gives 2′,3′-di-O-acetyl-5′-deoxy-5-fluorocytidine (II), which is condensed with pentyl chloroformate (III) by means of pyridine in dichromethane yielding 2′,3′-di-O-acetyl-5′-deoxy-5-fluoro-N4-(pentyloxycarbonyl)cytidine (IV). Finally, this compound is deacetylated with NaOH in dichloromethane/water. The diacetylated cytidine (II) can also be obtained by condensation of 5-fluorocytosine (V) with 1,2,3-tri-O-acetyl-5-deoxy-beta-D-ribofuranose (VI) by means of trimethylchlorosilane in acetonitrile or HMDS and SnCl4 in dichloromethane..
    • EP 602454, JP 94211891, US 5472949.
      • Capecitabine. Drugs Fut 1996, 21, 4, 358,
        • Bioorg Med Chem Lett2000,8,(7):1697,
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Ternary modified TiO2 as a simple and efficient photocatalyst for green organic synthesis https://amcrasto.theeurekamoments.com/2013/08/05/ternary-modified-tio2-as-a-simple-and-efficient-photocatalyst-for-green-organic-synthesis/ Mon, 05 Aug 2013 03:41:10 +0000 http://amcrasto.theeurekamoments.com/?p=1063 Continue reading Ternary modified TiO2 as a simple and efficient photocatalyst for green organic synthesis]]> Graphical abstract: Ternary modified TiO2 as a simple and efficient photocatalyst for green organic synthesis 

TiO2 ternary-modified with Fe3+, Ni2+, and Au nanoparticles exhibited a noticeable photocatalytic activity for selective cyclohexane oxidation with O2 under sunlight irradiation.

Ternary modified TiO2 as a simple and efficient photocatalyst for green organic synthesis

 
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Corresponding authors
a
World Premier International (WPI) Research Center, International Center for Materials Nanoarchitectonics (MANA), National Institute for Materials Science (NIMS), 1-1 Namiki, Tsukuba 305-0044, Japan
E-mail: IDE.Yusuke@nims.go.jp ;
Fax: +81-29-860-4826
b
Graduate School of Engineering, Department of Applied Chemistry, Hiroshima University, 1-4-1 Kagamiyama, Higashi-Hiroshima, Japan
Chem. Commun., 2013,49, 3652-3654

DOI: 10.1039/C3CC41174E
Received 13 Feb 2013, Accepted 15 Mar 2013
First published online 15 Mar 2013

 

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Cu(II)-catalyzed decarboxylative acylation of acyl C–H of formamides with -oxocarboxylic acids leading to -ketoamides https://amcrasto.theeurekamoments.com/2013/08/05/cuii-catalyzed-decarboxylative-acylation-of-acyl-c-h-of-formamides-with-oxocarboxylic-acids-leading-to-ketoamides/ Mon, 05 Aug 2013 03:37:17 +0000 http://amcrasto.theeurekamoments.com/?p=1056 Continue reading Cu(II)-catalyzed decarboxylative acylation of acyl C–H of formamides with -oxocarboxylic acids leading to -ketoamides]]>    Graphical abstract: Cu(ii)-catalyzed decarboxylative acylation of acyl C–H of formamides with α-oxocarboxylic acids leading to α-ketoamides 

Cu(II)-catalyzed decarboxylative acylation of acyl C–H of formamides with -oxocarboxylic acids leading to -ketoamides
Dengke Li,a   Min Wang,*a   Jie Liu,a   Qiong Zhaoa and   Lei Wang*ab  
Chem. Commun., 2013, 49(35), 3640-3642  
 http://pubs.rsc.org/en/content/articlelanding/2013/cc/c3cc41188eDOI: 10.1039/C3CC41188E

 
 
 
CuBr2-catalyzed decarboxylative acylation of the acyl C–H of N-monosubstituted and N,N-disubstituted formamides with α-oxocarboxylic acids leading to α-ketoamides was developed, which generated the corresponding products in good yields.
 
 
 
Corresponding authors
a
Department of Chemistry, Huaibei Normal University, Huaibei, P. R. China
E-mail: leiwang@chnu.edu.cn ;
Fax: +86-561-309-0518 ;
Tel: +86-561-380-2069
b
State Key Laboratory of Organometallic Chemistry, Shanghai Institute of Organic Chemistry, Chinese Academy of Sciences, Shanghai 200032, P. R. China
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Physicists Discover Theoretical Possibility of Large, Hollow Magnetic Cage Molecules https://amcrasto.theeurekamoments.com/2013/08/02/physicists-discover-theoretical-possibility-of-large-hollow-magnetic-cage-molecules/ Fri, 02 Aug 2013 07:34:10 +0000 http://amcrasto.theeurekamoments.com/?p=1042 Continue reading Physicists Discover Theoretical Possibility of Large, Hollow Magnetic Cage Molecules]]>

Illustration depicts a Mn24C18 cluster carrying a magnetic moment of 70 Bohr magnetons. (Credit: Image courtesy of Menghao Wu, Ph.D./VCU.)
Virginia Commonwealth University researchers have discovered, in theory, the possibility of creating large, hollow magnetic cage molecules that could one day be used in medicine as a drug delivery system to non-invasively treat tumors, and in other emerging technologies
Virginia Commonwealth University (2013, July 31). Physicists discover theoretical possibility of large, hollow magnetic cage molecules. ScienceDaily. Retrieved August 2, 2013, from http://www.sciencedaily.com­ /releases/2013/07/130731122916.htm?utm_source=feedburner&utm_medium=email&utm_campaign=Feed%3A+sciencedaily%2Fmatter_energy%2Forganic_chemistry+%28ScienceDaily%3A+Matter+%26+Energy+News+–+Organic+Chemistry%29
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Conjugated polymer nanoparticles: preparation, properties, functionalization and biological applications https://amcrasto.theeurekamoments.com/2013/07/31/conjugated-polymer-nanoparticles-preparation-properties-functionalization-and-biological-applications/ Wed, 31 Jul 2013 07:41:42 +0000 http://amcrasto.theeurekamoments.com/?p=1030 Continue reading Conjugated polymer nanoparticles: preparation, properties, functionalization and biological applications]]>

Chem. Soc. Rev., 2013, 42,6620-6633
DOI: 10.1039/C3CS60036J, Tutorial Review
Liheng Feng, Chunlei Zhu, Huanxiang Yuan, Libing Liu, Fengting Lv, Shu Wang
Beijing National Laboratory for Molecular Sciences, Key Laboratory of Organic Solids, Institute of Chemistry, Chinese Academy of Sciences, Beijing 100190, P.R. China 
E-mail: wangshu@iccas.ac.cn
This review provides an overview of the latest advancement in preparation, properties, functionalization and biological applications of conjugated polymer nanoparticles.

Conjugated polymer nanoparticles: preparation, properties, functionalization and biological applications

In the past few years, conjugated polymer nanoparticles (CPNs) have been successfully prepared and applied in the biological field because of their unique opto-electronic properties. The rapid development of CPNs is mainly attributed to their simple synthesis procedures and easy separation steps. The advantages of CPNs include high brightness, excellent photostability, low cytotoxicity, high quantum yield and versatile surface modification. The functionalization of CPNs with specific recognition elements imparts them good ability for targeted recognition and imaging in vitro and in vivo. CPNs can be applied to deliver drug and gene, and simultaneously to real-time monitor the release process due to their self-luminous characteristics. Moreover, CPNs can sensitize oxygen molecules to generate reactive oxygen species (ROS) which can kill adjacent bacteria and tumor cells. In this tutorial review, we provide a recent development of the preparation methods, properties, and functionalization strategies of CPNs, especially discussing their biological applications in targeted imaging, drug/gene delivery and biomedicine. The challenges and outlooks in this field will also be discussed.

http://pubs.rsc.org/en/Content/ArticleLanding/2013/CS/C3CS60036J?utm_source=feedburner&utm_medium=feed&utm_campaign=Feed%3A+rss%2FCS+%28RSC+-+Chem.+Soc.+Rev.+latest+articles%29

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Highlights from ASMC’13 – Advances in Synthetic and Medicinal Chemistry – May 5-8 2013, Moscow, Russia https://amcrasto.theeurekamoments.com/2013/07/31/highlights-from-asmc13-advances-in-synthetic-and-medicinal-chemistry-may-5-8-2013-moscow-russia/ Wed, 31 Jul 2013 07:33:18 +0000 http://amcrasto.theeurekamoments.com/?p=1026 Continue reading Highlights from ASMC’13 – Advances in Synthetic and Medicinal Chemistry – May 5-8 2013, Moscow, Russia]]>

Med. Chem. Commun., 2013, 4,1138-1144
DOI: 10.1039/C3MD90017G, Conference Report
Edmond Differding
 
EFMC & Differding Consulting, Route de Blocry 55, 1348 Louvain-la-Neuve, Belgium 
E-mail: edmond@differding.com
Received 14 Jun 2013, Accepted 14 Jun 2013
First published online 18 Jul 2013
ASMC’13 Moscow focused on new synthetic methodologies and aimed at expanding the drug discovery space from small to large molecules, including carbohydrates, novel protein scaffolds, dendrimers, and genes (Picture: St Basil’s Cathedral in Moscow’s Red Square)

Highlights from ASMC’13 – Advances in Synthetic and Medicinal Chemistry – May 5-8 2013, Moscow, Russia

ASMC’13 Moscow (May 5–8, 2013) focused on new synthetic methodologies and aimed at expanding the drug discovery space from small to large molecules, including carbohydrates, novel protein scaffolds, dendrimers, and genes

 

 

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